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Fig. 1. Characterization of 6ROX-CaM (A) HPLC analysis of 6ROX-CaM purified by a Vydac reverse-phase C8 column (4.6x150 mm). The chromatogram shows a single absorbance peak at 215 nm with a corresponding fluorescent peak measured at an excitation wavelength of 568 nm and an emission wavelength of 602 nm. (B) MALDI-TOF mass spectroscopy of undigested 6ROX-CaM. Obtained was an average mass of 17226.8 Da [average theoretical mass, 17223.1 Da (6ROX reacted =516.7 Da + 16706.4 Da for human liver CaM expressed in E. coli)]. (C,D) MALDI-TOF mass spectroscopy of the labeled peptides of 6ROX-CaM digested with trypsin. Peptide 75-77 (theoretical monoisotopic mass, 405.2 Da) bound to the 6ROX probe (monoisotopic mass, 922.2 Da; theoretical monoisotopic mass, 922.3 Da) (C). Peptide 75-86 (theoretical monoisotopic mass, 1479.7 Da) bound to the 6ROX probe (monoisotopic mass, 1995.6 Da; theoretical monoisotopic mass, 1997.3 Da) (D). (E,F) Activation of PDE by unlabeled CaM ( ) and 6ROX-CaM ( ). Km was 6.5 (±0.7) nM for CaM and 8.3 (±0.9) nM for 6ROX-CaM. (G) Fluorescent properties of 6ROX-CaM. Ca2+-titration of 100 nM 6ROX-CaM was carried out in 5 mM EGTA, 100 mM KCl, 2 mM MgCl2 and 50 mM KMES, pH 7.0 at 21°C. Emission was corrected for buffer. Ca2+ concentrations were in the order of rising relative fluorescence: 0.4 nM, 0.29 µM, 0.652 µM and 1.74 µM. (H) The effect of Ca2+-binding on tyrosine fluorescence of WT-CaM (+) and CaM1234 ( ). Fluorescence was monitored at an excitation wavelength of 278 nm and an emission wavelength of 305 nm. (Ii-Iiii) Measurement of the Kd of mTrp peptide binding to TACaM by stopped-flow kinetics. (Ii) Association kinetics. 12 nM TA-CaM was rapidly mixed with 175 nM mTrp peptide (concentrations in mixing chamber are given) in the same solution conditions as the other fluorescent measurements were made. The biphasic fluorescence increase was fitted by two exponentials at 45 seconds1 (0.75) and 3.8 seconds1 (0.25). (Iii) Observed rates of association are plotted as a function of mTrp peptide concentration. The gradient ( ) was 2.2x108 M1 seconds1. The rate of the slow step saturated at 3.8 seconds1 ( ). (Iiii) Ca2+/TA-CaM.mTrp complex dissociation kinetics. Ca2+/TA-CaM was displaced from the complex by an excess of 2 µM unlabeled CaM. The rate constant of dissociation was 0.003 seconds1.
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