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Fig. 1. Generation of ES cells heterozygous and homozygous for a Titin M-band deletion. (A) Generation of an ES cell clone heterozygous for a Titin M-band deletion. A linearised neo/tk Titin targeting vector was integrated by homologous recombination into one WT Titin allele to generate a heterozygous targeted clone, NEOR GANCS 1-F9. (WT WT cells with two normal chromosomes.) (B) Generation of ES cell clones homozygous for a Titin M-band deletion utilising a puro/tk cassette. A linearised puro/tk targeting vector was integrated by homologous recombination into the remaining WT Titin allele of clone NEOR GANCS 1-F9 to generate homozygous targeted clones NEOR PUROR GANCS 2-C5, 2-B11, 1-H6 and 1-G6 (labelled as 2-C5 etc on the figure). (C) Generation of an ES cell clone homozygous for a Titin M-band deletion utilising Cre recombination. Clone NEOR GANCS 1-F9 was transiently transfected with the pCAGGS-Cre-IRESpuro plasmid to excise the neo/tk cassette by Cre-mediated recombination between the direct-repeat loxP sites flanking the cassette. A resultant clone, NEOS GANCR 2-A10, contained a single loxP site at the deletion position. In a second round of targeting a linearised neo/tk Titin targeting vector was integrated by homologous recombination into the remaining WT Titin allele to generate a homozygous targeted clone, NEOR GANCS 1-D9. Restriction enzyme sites indicated are: AvaI(AV), EcoRI (RI), EcoRV (RV), I-SceI (I), NotI (N) and XbaI (X). Confirmation that the allele had been targeted was performed by Southern blot analysis of EcoRI (see Fig. 2) and EcoRV (data not shown) digested genomic DNA, using probes flanking the 5' and 3' homology arms, respectively. The sizes of the expected restriction fragments are shown in Fig. 2. Exon sequences are shown as red boxes (but with the kinase-encoding domain in one exon highlighted in pale blue), intron sequences as a thick black line, plasmid vector sequences as a thin black line, selection marker sequences as green (PGKneopA), blue (MC1tk) and purple (pApuroPGK) boxes, loxP sites as yellow triangles, and probe sequences as hatched boxes.
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