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First published online September 19, 2007
doi: 10.1242/10.1242/jcs.013771


Journal of Cell Science 120, 3337-3344 (2007)
Published by The Company of Biologists 2007
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Commentary

Mechanistic insights from structural studies of beta-catenin and its binding partners

Wenqing Xu1,* and David Kimelman2

1 Departments of Biological Structure
2 Departments of Biochemistry, University of Washington, Seattle, WA 98195, USA

* Author for correspondence (e-mail: wxu{at}u.washington.edu)

Accepted 19 July 2007


    Summary
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
beta-catenin is both a crucial regulator of cell adhesion and the central effector of the canonical Wnt signaling pathway. It functions as a protein organizer by interacting with numerous partners at the membrane, in the cytosol, and in the nucleus. Recent structural and biochemical studies have revealed how beta-catenin engages in critical protein-protein interactions by using its armadillo repeat region and its N- and C-terminal domains. The groove in the armadillo repeat region is a particularly interesting feature of beta-catenin, since it serves as a common binding site for several beta-catenin-binding partners, with steric hindrance limiting which partners can be bound at a specific time. These studies provide important insights into beta-catenin-mediated mechanisms of cell adhesion and Wnt signaling and suggest potential approaches for the design of therapeutic agents to treat diseases caused by misregulated beta-catenin expression.

Key words: beta-catenin structure, Wnt signaling, Cell adhesion, Protein-protein interaction


    Introduction
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
beta-catenin is a multi-functional protein that plays essential roles both at adherens junctions and in Wnt signaling. The majority of beta-catenin in the cell is associated with adherens junctions, where it interacts with the cytoplasmic region of cadherin (Fig. 1). Although beta-catenin was long thought to link cadherin to the cytoskeleton via {alpha}-catenin, recent work indicates that beta-catenin regulates the homodimerization of {alpha}-catenin, which in turn controls actin branching and bundling (Gates and Peifer, 2005Go; Weis and Nelson, 2006Go). In addition, there is a small and dynamic pool of beta-catenin in the cytosol and nucleus that is responsible for the transduction of Wnt signals. Wnt proteins play critical regulatory roles in many biological processes, including embryonic development and stem cell maintenance (Moon et al., 2002Go), and deregulation of Wnt signaling is associated with multiple diseases, including various cancers (Bienz and Clevers, 2000Go; Kinzler and Vogelstein, 1996Go; Moon et al., 2002Go; Morin, 1999Go; Nelson and Nusse, 2004Go; Polakis, 2000Go; Reya and Clevers, 2005Go).


Figure 1
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Fig. 1. Roles of beta-catenin in the cell. beta-catenin binds to E-cadherin and {alpha}-catenin at adherens junctions. In the vicinity of these juctions, {alpha}-catenin binds to actin as a homodimer. In the absence of Wnt signaling, beta-catenin joins the destruction complex (green), where it is phosphorylated by CK1{alpha} and GSK-3beta, which causes it to be ubiquitylated by the beta-TrCP ubiquitin ligase and subsequently degraded by the proteasome. In the presence of a Wnt signal, beta-catenin is not degraded and it moves to the nucleus, where it associates with DNA-binding members of the Tcf/LEF family and other associated transcription factors (not all of which are shown in the figure). This results in the activation of Wnt-target genes. Mutations in APC, axin or beta-catenin lead to stabilization of beta-catenin in the absence of a Wnt signal and consequent upregulation of Wnt-target genes.

 
In the absence of a Wnt signal, cytosolic beta-catenin is captured and phosphorylated by a cytoplasmic protein complex called the beta-catenin-destruction complex, which catalyzes the phosphorylation of beta-catenin and thus labels it for ubiquitin-dependent degradation by the proteasome (Kimelman and Xu, 2006Go) (Fig. 1). In the presence of a Wnt signal, through a mechanism that remains unclear, the phosphorylation of beta-catenin is inhibited, which leads to its accumulation in the cytosol. Accumulated beta-catenin migrates into the nucleus and binds to a DNA-binding protein of the Tcf/LEF family, and together they turn on the transcription of `canonical' (i.e. beta-catenin dependent) Wnt-response genes. In stem cells these genes include those involved in the cell cycle, whereas during embryonic development the spectrum of Wnt response genes varies with the cell type and age of the embryo.

Abnormal activation of the Wnt/beta-catenin pathway in certain stem or transit amplifying cells is caused by loss-of-function mutations in the tumor suppressors adenomatous polyposis coli protein (APC) and axin or gain-of-function mutations in beta-catenin, causing overproliferation of the cells and the onset of tumorigenesis owing to a constitutive increase in the levels of nuclear beta-catenin (Bienz and Clevers, 2000Go; Kinzler and Vogelstein, 1996Go; Moon et al., 2002Go; Morin, 1999Go; Nelson and Nusse, 2004Go; Polakis, 2000Go). A thorough understanding of the structural basis of the interactions between beta-catenin and its numerous binding partners is thus of crucial importance both for understanding the mechanisms of cell adhesion, canonical Wnt signaling, and Wnt-independent signaling through beta-catenin, as well as for the design of small molecules to manipulate beta-catenin-dependent transcriptional activation, which potentially have a variety of applications. Here we discuss the interaction of beta-catenin with its protein partners. Because of space limitations, we have focused on those that have experimentally determined 3D structures (for the complete set of partners, see http://www.stanford.edu/~rnusse/pathways/cell2.html).


    Three-dimensional structure of beta-catenin
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
beta-catenin has a central armadillo repeat domain (residues 141-664) composed of 12 armadillo repeats, an N-terminal domain that harbors the binding site for {alpha}-catenin as well as the GSK3 and CK1 phosphorylation sites that are recognized by the beta-TrCP ubiquitin ligase (Jiang and Struhl, 1998Go; Rimm et al., 1995Go; Wu et al., 2003Go), and a C-terminal domain (Fig. 2A) (Stadeli et al., 2006Go; Willert and Jones, 2006Go). The N- and C-terminal domains are sensitive to trypsin digestion and thus may be structurally flexible, whereas the central domain forms a relatively rigid scaffold (Huber et al., 1997Go). The central domain is the most conserved region of beta-catenin, which is consistent with its role as the binding site for most beta-catenin-binding partners. Each armadillo repeat contains approximately 42 residues, forming three helices arranged in a triangular shape. The 12 contiguous repeats form a superhelix that features a long, positively charged groove, in which the third helix of each repeat forms the floor of this groove (Fig. 2B).


Figure 2
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Fig. 2. Interaction of beta-catenin and its partners. (A) A summary of the regions of beta-catenin that the partners described here bind to. Black bars indicate regions of beta-catenin bound by the different partners whereas red dots indicate the sites on beta-catenin that bind to the phosphorylated Ser/Thr residues of E-cadherin and the APC 20aa repeats. APC p-20aa represents the phosphorylated form of the APC 20aa-repeat region. The red stars indicate the sites on beta-catenin phosphorylated by CK1{alpha} and GSK-3beta that create the binding site for beta-TrCP. (B) Structure of the beta-catenin armadillo repeat domain. The positions of the charged buttons (K312 and K435) are shown as circled Bs. The center of the groove of the armadillo repeat domain is shown as a dashed red line.

 

There are three irregularities in the armadillo repeat domain structure. First, there is a long flexible insertion between helices 2 and 3 in armadillo repeat 10, which creates a binding site for 14-3-3{zeta} when beta-catenin is phosphorylated in this region (Fang et al., 2007Go). Whether this insertion has additional roles is not known. Second, the seventh armadillo repeat contains only two helices (H2 and H3). It is uncertain whether this structural irregularity has any functional implications. Third, the first armadillo repeat is structurally more dynamic than the rest of the domain, and the first two helices of this repeat usually form a long, kinked helix.

The N- and C-terminal domains of beta-catenin were proposed to interact with the armadillo repeat domain by a fold-back mechanism, which could regulate the partner-binding properties of the armadillo repeat domain (Castano et al., 2002Go; Cox et al., 1999Go; Piedra et al., 2001Go; Solanas et al., 2004Go). Quantitative ITC analysis using purified proteins does not support this model, at least for proteins that bind tightly to the armadillo repeat domain (Choi et al., 2006Go). In the electron density map for the crystal structure of a full-length beta-catenin, the N- and C-terminal domain of beta-catenin are not visible, which indicates that the N- and C-terminal domains do not interact with the armadillo repeat domain in a static conformation (Y. Xing and W.X., unpublished). Since the N- and C-terminal domains are negatively charged, and the groove of the armadillo repeat domain is highly positively charged, it is plausible that the N- and C-termini interact with the armadillo repeat domain in a highly dynamic and non-specific manner.

The 3D structures of beta-catenin peptides containing the N-terminal GSK3 phosphorylation sites (S33 and S37) have also been determined (Megy et al., 2005aGo; Megy et al., 2005bGo; Wu et al., 2003Go) since this is the recognition site for the beta-TrCP ubiquitin ligase (Hart et al., 1999Go; Kitagawa et al., 1999Go; Latres et al., 1999Go; Liu et al., 1999Go; Winston et al., 1999Go). These structures showed that the region covering beta-catenin residues 20-31 has a tendency to form a helix, which facilitates the recognition of the DpS33G{theta}XpS37 motif ({theta} denotes a hydrophobic amino acid and pS are the serines phosphorylated by GSK3) by beta-TrCP (Megy et al., 2005aGo; Megy et al., 2005bGo; Wu et al., 2003Go).


    The groove of the armadillo repeat domain
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
The crystal structure of the beta-catenin–Tcf3 complex revealed that the 51-residue beta-catenin-binding domain of Tcf comprises an elongated region that runs along much of the groove formed by the armadillo repeat domain (Graham et al., 2000Go). Structure-based mutagenesis of beta-catenin suggested that cadherins share at least part of this binding site (Graham et al., 2000Go). The crystal structure of a beta-catenin–E-cadherin complex confirmed this and showed that the E-cadherin cytoplasmic domain has more extensive interactions with the groove than does Tcf3 (Huber and Weis, 2001Go).

Crystal structures of several other proteins in complexes with the beta-catenin armadillo repeat domain have been determined, including axin, APC, {alpha}-catenin, BCL9 and ICAT (inhibitor of beta-catenin and Tcf4) (Daniels and Weis, 2002Go; Eklof Spink et al., 2001Go; Graham et al., 2002Go; Graham et al., 2001Go; Ha et al., 2004Go; Pokutta and Weis, 2000Go; Poy et al., 2001Go; Sampietro et al., 2006Go; Xing et al., 2003Go; Xing et al., 2004Go). As in the case of Tcf and cadherin, these structures revealed that numerous beta-catenin-binding partners have overlapping binding sites in the groove of the armadillo repeat domain (Fig. 2A). Biochemical analysis confirmed that many of these partners (e.g. Tcf, cadherin, ICAT and APC) cannot bind to beta-catenin simultaneously (Choi et al., 2006Go; Hulsken et al., 1994Go; von Kries et al., 2000Go). Spatial segregation of different beta-catenin-binding partners within the cell may therefore be important for the proper function of these proteins. In addition, competition between them could be important for regulating the Wnt signaling pathway.

The groove within the central domain can be divided into several sections on the basis of the way beta-catenin-binding partners bind. Armadillo repeats 5-9 form the core binding site for Tcf and cadherin and an essential part of the binding sites for APC and ICAT (Fig. 2A; see below). All of these proteins interact with this region of beta-catenin through conserved Dx{theta}{theta}x{Phi}x2-7E binding motifs ({theta} and {Phi} are hydrophobic and aromatic residues, respectively), displaying conformations almost identical to that first observed in the beta-catenin–Tcf3 crystal structure (Daniels and Weis, 2002Go; Eklof Spink et al., 2001Go; Graham et al., 2002Go; Graham et al., 2001Go; Graham et al., 2000Go; Ha et al., 2004Go; Huber and Weis, 2001Go; Poy et al., 2001Go; Xing et al., 2004Go). Two pairs of salt bridges exist in all of these complexes, formed between Lys435 and Lys312 of beta-catenin and the Asp and Glu residues in the Dx{theta}{theta}x{Phi}x2-7E motif of the beta-catenin-binding partners, respectively. These two salt bridges, especially that involving Lys435, are crucial for beta-catenin–partner interactions in this region – and were thus dubbed `charged buttons' since they fasten the partners to beta-catenin (Graham et al., 2000Go) (Fig. 2B). Since the beta-catenin-binding partners have no apparent evolutionary relationship, it was surprising to find they have adopted the same sequence motif to recognize these two specific lysine residues among the many lysine residues in this groove.

Another critical binding region for cadherin, Tcf, APC and axin is the groove in armadillo repeats 3-4 (Fig. 2A). Tcf and axin both bind to this region by using a single {alpha}-helix. The Tcf helix runs antiparallel and the axin helix runs parallel to the axis of the armadillo repeat domain superhelix (Graham et al., 2001Go; Graham et al., 2000Go; Poy et al., 2001Go; Xing et al., 2003Go). Both APC and cadherin contain a conserved SxxxSLSSL motif that interacts with this region, using a very similar conformation, in a phosphorylation-dependent manner (Fig. 2A, and see below) (Ha et al., 2004Go; Huber and Weis, 2001Go; Xing et al., 2004Go).


Figure 3
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Fig. 3. beta-catenin complexes in cell adhesion. Crystal structures of the beta-catenin armadillo repeat domain (yellow) in complex with the E-cadherin cytoplasmic domain (red) and the dimerization and beta-catenin-binding domain of {alpha}-catenin (green) were superimposed on the basis of shared beta-catenin residues 145-148. Note the disruption of the first helix in the armadillo repeat domain upon {alpha}-catenin binding, which potentially produces a hinge, allowing structural flexibility between {alpha}-catenin and beta-catenin. beta-catenin Y142, which disrupts {alpha}-catenin binding upon phosphorylation, and Y654, which modulates the interaction between beta-catenin and E-cadherin upon phosphorylation, are shown in purple. Red dashes indicate flexible regions of E-cadherin.

 

    beta-catenin at adherens junctions
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
The majority of beta-catenin molecules in the cell are associated with cadherins. The cytoplasmic domain of cadherin interacts with the entire groove of the beta-catenin armadillo repeat domain (Fig. 3) (Huber and Weis, 2001Go). As discussed above, the `core' beta-catenin-binding region of E-cadherin interacts with armadillo repeats 5-9, which include K435 and K312. E-cadherin contains an {alpha}-helix N-terminal to this region that docks in the groove formed by armadillo repeats 11-12. beta-catenin residue Y654 lies within this region (Fig. 3); its phosphorylation by Src reduces the affinity of E-cadherin for beta-catenin by approximately 85%, apparently by disrupting the docking of the E-cadherin helix (Huber and Weis, 2001Go; Roura et al., 1999Go).

C-terminal to the E-cadherin core region are E-cadherin regions IV and V. Region IV of the E-cadherin cytoplasmic domain contains several Ser/Thr phosphorylation sites. This region is disordered when unphosphorylated but interacts extensively with armadillo repeats 3-4 when phosphorylated (Fig. 2A) (Huber and Weis, 2001Go). This enhances binding of E-cadherin to beta-catenin by several hundred-fold and may thus regulate the beta-catenin–E-cadherin interaction in vivo (Choi et al., 2006Go). Region V at the very C-terminus of E-cadherin forms a two-helix motif that dynamically binds to the hydrophobic N-terminal tip of the beta-catenin armadillo repeat (Fig. 3); this appears to play an auxiliary role in the beta-catenin–E-cadherin interaction (Huber and Weis, 2001Go; Sampietro et al., 2006Go).

N-terminal to the first armadillo repeat of beta-catenin is an extended helix (residues 120-147) that forms the binding site for {alpha}-catenin (Fig. 3). The beta-catenin–{alpha}-catenin interface was first revealed by the crystal structure of a beta-catenin–{alpha}-catenin fusion protein (beta{alpha}-cat) (Pokutta and Weis, 2000Go). The binding of {alpha}-catenin to beta-catenin disrupts the continuity of the first armadillo repeat around Y142 to D144, creating a hinged region (Fig. 3). This hinged region accommodates both E-cadherin (region V) and {alpha}-catenin, which allows beta-catenin to bind to both {alpha}-catenin and E-cadherin simultaneously (Fig. 3) (Huber and Weis, 2001Go; Pokutta and Weis, 2000Go). Importantly, the beta-catenin-binding site on {alpha}-catenin overlaps with the {alpha}-catenin homodimerization interface. {alpha}-catenin can thus be either in a homodimeric form, which is required for its interaction with actin, or bound to E-cadherin through beta-catenin, which prevents the binding of {alpha}-catenin to the actin cytoskeleton (Drees et al., 2005Go; Yamada et al., 2005Go). Thus, {alpha}-catenin in the cell cannot simultaneously be bound to both actin and beta-catenin (Fig. 1). Instead of linking actin to E-cadherin, {alpha}-catenin has been proposed to function as a key regulator of actin dynamics in the vicinity of E-cadherin (Drees et al., 2005Go; Yamada et al., 2005Go).


    Interactions in the beta-catenin-destruction complex
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
Phosphorylation of beta-catenin in the beta-catenin-destruction complex is the central regulatory step of canonical Wnt signaling. In this complex, CK1{alpha} phosphorylates S45, which primes the sequential phosphorylation of T41, S37 and S33 by GSK-3beta. It is generally accepted that, once S33 and S37 are phosphorylated, beta-catenin's fate is sealed: the phosphorylated beta-catenin is recruited by the beta-TrCP-containing ubiquitin ligase, which adds ubiquitins to beta-catenin, causing it to be degraded by the proteasome (Fig. 1). beta-catenin interacts with two proteins in the complex: APC and the scaffolding protein axin. The beta-catenin-binding site in axin lies just C-terminal to the GSK-3beta-binding site, apparently positioning GSK-3beta close to the phosphorylation target sites in the beta-catenin N-terminus. The core beta-catenin-binding domain of axin (only 17 residues long) forms a helix that docks in the groove formed by armadillo repeats 3 and 4 (Fig. 4) (Xing et al., 2003Go).


Figure 4
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Fig. 4. Structure of beta-catenin complexes in the beta-catenin destruction complex. Crystal structures of the beta-catenin armadillo repeat domain in complex with the phosphorylated third 20aa repeat of APC (in red) and the beta-catenin-binding domain of axin (in blue) were superimposed on the structure of the beta-catenin armadillo repeat domain. The positions of the four phosphorylated residues in APC 20aa repeat 3 are shown.

 


Figure 5
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Fig. 5. Structure of a beta-catenin transcriptional complex. Crystal structure of the beta-catenin armadillo repeat domain in complex with Tcf4 (red) and BCL9 (cyan). The charged button lysines are shown in blue.

 
APC is the only protein that contains multiple apparent beta-catenin-binding sites. It contains two types of beta-catenin-binding motif: three 15 amino acid (15aa) repeats and seven 20 amino acid (20aa) repeats. The APC 15aa repeats bind to the groove region of repeats 5-9 (Fig. 2A), displaying a binding affinity (Kd) of 0.1-1 µM (Eklof Spink et al., 2001Go; Liu et al., 2006Go), and are not regulated by phosphorylation. By contrast, the 20aa repeats each comprise a highly conserved 20-residue sequence that has potential phosphorylation sites in a consensus SXXSSLSXLS motif. Phosphorylation of these by CK1 and GSK-3beta dramatically enhances the ability of APC to bind beta-catenin, which suggests this plays a crucial role in Wnt signaling (Ha et al., 2004Go; Rubinfeld et al., 2001Go; Xing et al., 2004Go).

In vitro isothermal calorimetric (ITC) analysis showed that, despite their significant sequence similarity, the different beta-catenin-binding repeats of APC have dramatically different affinities for beta-catenin and thus may play different biological roles. The phosphorylated third 20aa repeat has by far the tightest binding affinity for beta-catenin of all the repeats (Liu et al., 2006Go). Interestingly, most APC mutations associated with colon cancers have lost this repeat (Bienz and Clevers, 2000Go; Nathke, 2004Go; Polakis, 1995Go). The crystal structure of its phosphorylated form in complex with the beta-catenin armadillo repeat domain revealed that a single APC 20aa repeat, together with its flanking residues, is packed along almost the entire groove of the armadillo repeat domain (Fig. 4) (Ha et al., 2004Go; Xing et al., 2004Go). The four phosphorylated residues help form a hairpin structure that binds in the groove region of armadillo repeats 1-5. Surprisingly, the residues N-terminal to the third 20aa repeat bind along most of the groove region of repeats 5-12 in a conformation almost identical to that of Tcf and E-cadherin, with APC residues D1486 and E1494 forming salt bridges with the charged buttons K435 and K312 on beta-catenin. This significantly increases the affinity of APC for beta-catenin (Liu et al., 2006Go).

Structural and biochemical studies demonstrated that the phosphorylated APC 20aa repeats, but not the 15aa repeats or unphosphorylated 20aa repeats, strongly compete with axin for binding to beta-catenin (Xing et al., 2003Go). We have therefore suggested that beta-catenin initially binds to both axin and the 15aa repeats, which positions it for phosphorylation by CK1{alpha} and GSK-3beta. Then, the 20aa repeat 3 is phosphorylated, which causes it to displace axin from beta-catenin, allowing beta-catenin to leave the destruction complex. In this way APC functions as a `rejuvenator' of the beta-catenin destruction complex by releasing phosphorylated beta-catenin from axin and allowing the recruitment of the next beta-catenin substrate (Kimelman and Xu, 2006Go; Xing et al., 2004Go).

In an alternative model (Ha et al., 2004Go), the phosphorylation state of the APC controls the rate of release of beta-catenin from the destruction complex. In this model, the binding of axin and its associated kinases and phosphatases to APC results in heterogeneous APC phosphorylation. In the absence of a Wnt signal, the cytosolic beta-catenin concentration is very low such that beta-catenin will only interact with phosphorylated APC (pAPC), which binds beta-catenin with high affinity compared with the unphosphorylated APC. The beta-catenin–pAPC dimer is then recruited into the destruction complex owing to the ability of axin to bind APC. Because the phosphorylated APC binds beta-catenin tightly, it releases beta-catenin only slowly from the destruction complex, thus sequestering the beta-catenin. In the presence of a Wnt signal, the cellular beta-catenin concentration will increase and APC phosphorylation should decrease (a prediction of the model not yet proven); so binding of beta-catenin to unphosphorylated APC becomes significant. When the beta-catenin–APC dimer joins the destruction complex by binding of axin directly to beta-catenin as well as its binding to APC, beta-catenin is phosphorylated and then released quickly owing to the relatively weak interaction between unphosphorylated APC and beta-catenin. The increased turnover of the destruction complex in the presence of a Wnt signal is proposed to be important for shutting off the Wnt signal after a certain time (Ha et al., 2004Go).


    Post-translational modifications of beta-catenin
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
beta-catenin is tightly regulated by a plethora of post-translational modifications, including Ser/Thr and Tyr phosphorylation at several sites, ubiquitylation and acetylation (Table 1 lists all known modifications of beta-catenin, only some of which are discussed here). These modifications all occur in the flexible N- and C-terminal domains or on the surface of the armadillo repeat domain. Therefore, none is likely to cause a large scale conformational change in the armadillo repeat domain, although local structural changes in this domain are produced in some cases (Table 1). For example, phosphorylation of beta-catenin at S246 by Cdk5 (Munoz et al., 2007Go) causes the binding of the prolyl isomerase Pin1, which prevents APC from binding to beta-catenin, thereby preventing beta-catenin degradation and causing the activation of Wnt target genes (Ryo et al., 2001Go). Intriguingly, elevated Pin1 levels are observed in breast and colon cancer tissues, and the levels of expression correlate with tumor grade and cyclin D1 expression (Kuramochi et al., 2006Go; Pang et al., 2004Go; Wulf et al., 2001Go). Pin1 bound to beta-catenin is proposed to isomerize beta-catenin residue P247 (Ryo et al., 2001Go), which lies right in the middle of the region that binds to phosphorylated APC 20aa repeats (Ha et al., 2004Go; Xing et al., 2004Go). Thus, a local structural change in this region could have a major effect on the affinity of APC for beta-catenin.


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Table 1. Post-translational modifications of beta-catenin

 

An important question in the field is whether the two essential functions of beta-catenin, cell adhesion and transcriptional activation, are related. In C. elegans, different beta-catenin-like proteins perform these roles (Kidd, 3rd et al., 2005Go; Korswagen et al., 2000Go; Natarajan et al., 2001Go), whereas in most species one beta-catenin carries out both functions. It is not clear whether there is any evolutionary advantage to this, and the relationship between the beta-catenin at the membrane and beta-catenin in the nucleus is still a contentious issue. In principle, any change in the cell that releases enough beta-catenin from the membrane that the destruction complex cannot process it all should increase the cytosolic and nuclear levels of beta-catenin. Whether this actually happens is unclear. Certain receptor tyrosine kinases (e.g. EGFR and Met) can synergize with Wnt/beta-catenin signaling, possibly by directly phosphorylating tyrosine residues in beta-catenin (Brembeck et al., 2004Go; Bustos et al., 2006Go; Coluccia et al., 2007Go; Roura et al., 1999Go; Zeng et al., 2006Go), and thus skewing its role towards transcriptional activation. beta-catenin Y142 (Fig. 3) – a potential regulatory site – was initially proposed to be a site whose phosphorylation would disrupt {alpha}-catenin binding and promote the binding of the transcription factor BCL9-2 (and presumably the related factor BCL9) (Brembeck et al., 2004Go), which could thus play a major role switching beta-catenin between its roles in adhesion and transcription. However, structural, thermodynamic and functional studies demonstrate that phosphorylation of Y142 does not promote BCL9-2 binding, although it does abolish binding of {alpha}-catenin to beta-catenin (Hoffmans and Basler, 2007Go; Sampietro et al., 2006Go). Although there is no conclusive evidence that decreases in beta-catenin at the membrane lead to increased stabilization of nuclear beta-catenin, the possibility that this occurs cannot be ruled out.


    Interactions in the nucleus
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
In the nucleus, beta-catenin forms multiple protein complexes with either Wnt pathway inhibitors, such as ICAT and Chibby, or transcriptional co-activators, including BCL9/BCL9-2, CBP/p300, pygopus, Brg-1, Pontin-52, MED12 and parafibromin/Hyrax (Fig. 1) (Barker et al., 2001Go; Bauer et al., 2000Go; Brembeck et al., 2004Go; Hecht et al., 2000Go; Kim et al., 2006Go; Kramps et al., 2002Go; Miyagishi et al., 2000Go; Mosimann et al., 2006Go; Nusse, 1999Go; Roose and Clevers, 1999Go; Sun et al., 2000Go; Takemaru and Moon, 2000Go; Thompson et al., 2002Go) and members of the Tcf/LEF family of DNA-binding proteins. It remains unclear whether different beta-catenin-associated co-activators bind to beta-catenin simultaneously. Some Wnt pathway inhibitors, such as ICAT, inhibit Wnt signaling by interfering with the formation of appropriate beta-catenin-containing transactivation complexes (Tago et al., 2000Go; Takemaru et al., 2003Go). However, it is largely unknown how the interactions between beta-catenin and inhibitory proteins are regulated in the cell.

In the presence of a Wnt signal, beta-catenin is recruited to the promoters of Wnt-responsive genes through its interaction with members of the Tcf/LEF family. beta-catenin–Tcf complexes are essential for transcription of a plethora of genes (Clevers, 2006Go). The N-terminal ~50 residues of Tcf/LEF are required for its interaction with beta-catenin. Residues 16-32 of human Tcf4 contain the Dx{theta}{theta}x{Phi}x2-7E sequence that interacts with armadillo repeats 5-9 (Fig. 5). Residues 40-50 form an {alpha}-helix that docks in the groove of armadillo repeats 3-4 and engage in mostly hydrophobic interactions with beta-catenin. At the beta-catenin–Tcf4 interface, the salt bridge formed between beta-catenin K435 (one of the charged buttons) and Tcf4 D16 is by far the most crucial interaction (Fasolini et al., 2003Go); the other salt bridge is formed between the second charged button, K312, and one of several acidic residues in the Tcf/LEF E24GEQEE29 sequence that adopts either extended or helical conformations (Graham et al., 2001Go; Poy et al., 2001Go). In addition to the N-terminal domain, Tcf/LEF may have a secondary beta-catenin-binding site, which includes sequences just N-terminal to the DNA-binding HMG domain (this is suggested by the proteolysis pattern of Tcf/LEF protected by beta-catenin). This secondary binding site overlaps that of the transcriptional co-repressor Groucho/TLE and is critical for displacing Groucho/TLE from Tcf/LEF in the presence of a Wnt signal (Daniels and Weis, 2005Go).

beta-catenin promotes the transcription of Wnt responsive genes by recruiting several transcriptional co-activators, including BCL9. The crystal structure of a BCL9–beta-catenin–Tcf4 complex revealed that the BCL9 beta-catenin-binding domain forms an {alpha}-helix that binds to the first armadillo repeat of beta-catenin so that it `caps' the N-terminus of the armadillo repeat domain (Fig. 5) (Sampietro et al., 2006Go). It therefore differs from most other known beta-catenin partners, except region V of E-cadherin and {alpha}-catenin, which also bind in this region (Fig. 3). The beta-catenin–BCL9 interface can be mutated to prevent BCL9 from binding to beta-catenin without affecting cadherin or {alpha}-catenin binding, which demonstrates that BCL9 binds to beta-catenin through unique, essential contacts (Sampietro et al., 2006Go). Note that despite a lack of deep pockets at this interface, the BCL9-binding site in beta-catenin is structurally dynamic, which would allow more compounds to bind this region with high affinity and interfere with BCL9 binding since compounds can bind to a dynamic surface with an induced-fit mechanism. Therefore the BCL9–beta-catenin interface is a potentially good target for drugs to block beta-catenin signaling. Some other beta-catenin-binding transcriptional activators, such as CBP and hyrax/parafibromin, interact with the C-terminal domain of beta-catenin (Brembeck et al., 2004Go; Hecht et al., 2000Go; Kramps et al., 2002Go; Miyagishi et al., 2000Go; Mosimann et al., 2006Go; Sun et al., 2000Go; Takemaru and Moon, 2000Go). However, the structural basis of these interactions remains to be revealed.


    Concluding remarks
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 
In the past several years, structural and biochemical studies have laid a solid foundation for understanding some basic issues in beta-catenin-regulated cell adhesion and Wnt signaling. In the coming years, structural and biochemical studies should be carried out with larger beta-catenin-containing complexes. For example, a through understanding of how Wnt signaling inhibits beta-catenin phosphorylation in the destruction complex will require biochemical and biophysical studies of the complete complex in different functional states.

In addition, structural studies will continue to allow the design of compounds to manipulate beta-catenin-dependent signaling. The beta-catenin–Tcf complex has been considered a premium drug target since it is the essential final effector of canonical Wnt signaling and since it is downstream of most cancer-associated Wnt pathway mutations (e.g. APC mutations). However, a compound that disrupts the beta-catenin–Tcf interaction could also interfere with the beta-catenin–cadherin and beta-catenin–APC interactions, since Tcf, cadherin and APC share the core binding site in the groove formed by the armadillo repeat domain (Figs 3, 4, 5). Other protein-protein interfaces in the beta-catenin-containing transcriptional complex, such as those involving beta-catenin and BCL9, could therefore also be attractive targets. It will be valuable to determine the structure of beta-catenin in complex with other essential transcriptional co-activators, including hyrax/parafibromin and CBP/p300, to identify other regions that might serve as useful drug targets.


    Acknowledgments
 
This work was supported by NIH grants CA90351 to W.X. and HD27262 to D.K.


    References
 Top
 Summary
 Introduction
 Three-dimensional structure of...
 The groove of the...
 beta-catenin at adherens...
 Interactions in the beta-catenin...
 Post-translational modifications...
 Interactions in the nucleus
 Concluding remarks
 References
 

Barker, N., Hurlstone, A., Musisi, H., Miles, A., Bienz, M. and Clevers, H. (2001). The chromatin remodelling factor Brg-1 interacts with beta-catenin to promote target gene activation. EMBO J. 20, 4935-4943.[CrossRef][Medline]

Bauer, A., Chauvet, S., Huber, O., Usseglio, F., Rothbacher, U., Aragnol, D., Kemler, R. and Pradel, J. (2000). Pontin52 and reptin52 function as antagonistic regulators of beta-catenin signalling activity. EMBO J. 19, 6121-6130.[CrossRef][Medline]

Bek, S. and Kemler, R. (2002). Protein kinase CKII regulates the interaction of beta-catenin with {alpha}-catenin and its protein stability. J. Cell Sci. 115, 4743-4753.[CrossRef][Medline]

Bienz, M. and Clevers, H. (2000). Linking colorectal cancer to Wnt signaling. Cell 103, 311-320.[CrossRef][Medline]

Brembeck, F. H., Schwarz-Romond, T., Bakkers, J., Wilhelm, S., Hammerschmidt, M. and Birchmeier, W. (2004). Essential role of BCL9-2 in the switch between beta-catenin's adhesive and transcriptional functions. Genes Dev. 18, 2225-2230.[Abstract/Free Full Text]

Bustos, V. H., Ferrarese, A., Venerando, A., Marin, O., Allende, J. E. and Pinna, L. A. (2006). The first armadillo repeat is involved in the recognition and regulation of beta-catenin phosphorylation by protein kinase CK1. Proc. Natl. Acad. Sci. USA 103, 19725-19730.[Abstract/Free Full Text]

Castano, J., Raurell, I., Piedra, J. A., Miravet, S., Dunach, M. and Garcia de Herreros, A. (2002). beta-catenin N- and C-terminal tails modulate the coordinated binding of adherens junction proteins to beta-catenin. J. Biol. Chem. 277, 31541-31550.[Abstract/Free Full Text]

Choi, H. J., Huber, A. H. and Weis, W. I. (2006). Thermodynamics of beta-catenin-ligand interactions: the roles of the N- and C-terminal tails in modulating binding affinity. J. Biol. Chem. 281, 1027-1038.[Abstract/Free Full Text]

Clevers, H. (2006). Wnt/beta-catenin signaling in development and disease. Cell 127, 469-480.[CrossRef][Medline]

Coluccia, A. M., Vacca, A., Dunach, M., Mologni, L., Redaelli, S., Bustos, V. H., Benati, D., Pinna, L. A. and Gambacorti-Passerini, C. (2007). Bcr-Abl stabilizes beta-catenin in chronic myeloid leukemia through its tyrosine phosphorylation. EMBO J. 26, 1456-1466.[CrossRef][Medline]

Cox, R. T., Pai, L. M., Kirkpatrick, C., Stein, J. and Peifer, M. (1999). Roles of the C terminus of Armadillo in Wingless signaling in Drosophila. Genetics 153, 319-332.[Abstract/Free Full Text]

Daniels, D. L. and Weis, W. I. (2002). ICAT inhibits beta-catenin binding to Tcf/Lef-family transcription factors and the general coactivator p300 using independent structural modules. Mol. Cell 10, 573-584.[CrossRef][Medline]

Daniels, D. L. and Weis, W. I. (2005). beta-catenin directly displaces Groucho/TLE repressors from Tcf/Lef in Wnt-mediated transcription activation. Nat. Struct. Mol. Biol. 12, 364-371.[CrossRef][Medline]

Drees, F., Pokutta, S., Yamada, S., Nelson, W. J. and Weis, W. I. (2005). {alpha}-catenin is a molecular switch that binds E-cadherin-beta-catenin and regulates actin-filament assembly. Cell 123, 903-915.[CrossRef][Medline]

Eklof Spink, K., Fridman, S. G. and Weis, W. I. (2001). Molecular mechanisms of beta-catenin recognition by adenomatous polyposis coli revealed by the structure of an APC-beta-catenin complex. EMBO J. 20, 6203-6212.[CrossRef][Medline]

Fang, D., Hawke, D., Zheng, Y., Xia, Y., Meisenhelder, J., Nika, H., Mills, G. B., Kobayashi, R., Hunter, T. and Lu, Z. (2007). Phosphorylation of beta-catenin by AKT promotes beta-catenin transcriptional activity. J. Biol. Chem. 282, 11221-11229.[Abstract/Free Full Text]

Fasolini, M., Wu, X., Flocco, M., Trosset, J. Y., Oppermann, U. and Knapp, S. (2003). Hot spots in Tcf4 for the interaction with beta-catenin. J. Biol. Chem. 278, 21092-21098.[Abstract/Free Full Text]

Gates, J. and Peifer, M. (2005). Can 1000 reviews be wrong? Actin, {alpha}-Catenin, and adherens junctions. Cell 123, 769-772.[CrossRef][Medline]

Graham, T. A., Weaver, C., Mao, F., Kimelman, D. and Xu, W. (2000). Crystal structure of a beta-catenin/Tcf complex. Cell 103, 885-896.[CrossRef][Medline]

Graham, T. A., Ferkey, D. M., Mao, F., Kimelman, D. and Xu, W. (2001). Tcf4 can specifically recognize beta-catenin using alternative conformations. Nat. Struct. Biol. 8, 1048-1052.[CrossRef][Medline]

Graham, T. A., Clements, W. K., Kimelman, D. and Xu, W. (2002). The crystal structure of the beta-catenin/ICAT complex reveals the inhibitory mechanism of ICAT. Mol. Cell 10, 563-571.[CrossRef][Medline]

Ha, N. C., Tonozuka, T., Stamos, J. L., Choi, H. J. and Weis, W. I. (2004). Mechanism of phosphorylation-dependent binding of APC to beta-catenin and its role in beta-catenin degradation. Mol. Cell 15, 511-521.[CrossRef][Medline]

Hart, M., Concordet, J. P., Lassot, I., Albert, I., del los Santos, R., Durand, H., Perret, C., Rubinfeld, B., Margottin, F., Benarous, R. et al. (1999). The F-box protein beta-TrCP associates with phosphorylated beta-catenin and regulates its activity in the cell. Curr. Biol. 9, 207-210.[CrossRef][Medline]

Hecht, A., Vleminckx, K., Stemmler, M. P., van Roy, F. and Kemler, R. (2000). The p300/CBP acetyltransferases function as transcriptional coactivators of beta-catenin in vertebrates. EMBO J. 19, 1839-1850.[CrossRef][Medline]

Hino, S., Tanji, C., Nakayama, K. I. and Kikuchi, A. (2005). Phosphorylation of beta-catenin by cyclic AMP-dependent protein kinase stabilizes beta-catenin through inhibition of its ubiquitination. Mol. Cell. Biol. 25, 9063-9072.[Abstract/Free Full Text]

Hoffmans, R. and Basler, K. (2007). BCL9-2 binds Arm/beta-catenin in a Tyr142-independent manner and requires Pygopus for its function in Wg/Wnt signaling. Mech. Dev. 124, 59-67.[CrossRef][Medline]

Huber, A. H. and Weis, W. I. (2001). The structure of the beta-catenin/E-cadherin complex and the molecular basis of diverse ligand recognition by beta-catenin. Cell 105, 391-402.[CrossRef][Medline]

Huber, A. H., Nelson, W. J. and Weis, W. I. (1997). Three-dimensional structure of the armadillo repeat region of beta-catenin. Cell 90, 871-882.[CrossRef][Medline]

Hulsken, J., Birchmeier, W. and Behrens, J. (1994). E-cadherin and APC compete for the interaction with beta-catenin and the cytoskeleton. J. Cell Biol. 127, 2061-2069.[Abstract/Free Full Text]

Jiang, J. and Struhl, G. (1998). Regulation of the Hedgehog and Wingless signalling pathways by the F-box/WD40-repeat protein Slimb. Nature 391, 493-496.[CrossRef][Medline]

Kidd, A. R., 3rd, Miskowski, J. A., Siegfried, K. R., Sawa, H. and Kimble, J. (2005). A beta-catenin identified by functional rather than sequence criteria and its role in Wnt/MAPK signaling. Cell 121, 761-772.[CrossRef][Medline]

Kim, S., Xu, X., Hecht, A. and Boyer, T. G. (2006). Mediator is a transducer of Wnt/beta-catenin signaling. J. Biol. Chem. 281, 14066-14075.[Abstract/Free Full Text]

Kimelman, D. and Xu, W. (2006). beta-catenin destruction complex: insights and questions from a structural perspective. Oncogene 25, 7482-7491.[CrossRef][Medline]

Kinzler, K. W. and Vogelstein, B. (1996). Lessons from hereditary colorectal cancer. Cell 87, 159-170.[CrossRef][Medline]

Kitagawa, M., Hatakeyama, S., Shirane, M., Matsumoto, M., Ishida, N., Hattori, K., Nakamichi, I., Kikuchi, A. and Nakayama, K. (1999). An F-box protein, FWD1, mediates ubiquitin-dependent proteolysis of beta-catenin. EMBO J. 18, 2401-2410.[CrossRef][Medline]

Korswagen, H. C., Herman, M. A. and Clevers, H. C. (2000). Distinct beta-catenins mediate adhesion and signalling functions in C. elegans. Nature 406, 527-532.[CrossRef][Medline]

Kramps, T., Peter, O., Brunner, E., Nellen, D., Froesch, B., Chatterjee, S., Murone, M., Zullig, S. and Basler, K. (2002). Wnt/wingless signaling requires BCL9/legless-mediated recruitment of pygopus to the nuclear beta-catenin-TCF complex. Cell 109, 47-60.[CrossRef][Medline]

Kuramochi, J., Arai, T., Ikeda, S., Kumagai, J., Uetake, H. and Sugihara, K. (2006). High Pin1 expression is associated with tumor progression in colorectal cancer. J. Surg. Oncol. 94, 155-160.[CrossRef][Medline]

Latres, E., Chiaur, D. S. and Pagano, M. (1999). The human F box protein beta-Trcp associates with the Cul1/Skp1 complex and regulates the stability of beta-catenin. Oncogene 18, 849-854.[CrossRef][Medline]

Levy, L., Wei, Y., Labalette, C., Wu, Y., Renard, C. A., Buendia, M. A. and Neuveut, C. (2004). Acetylation of beta-catenin by p300 regulates beta-catenin-Tcf4 interaction. Mol. Cell. Biol. 24, 3404-3414.[Abstract/Free Full Text]

Liu, C., Kato, Y., Zhang, Z., Do, V. M., Yankner, B. A. and He, X. (1999). beta-Trcp couples beta-catenin phosphorylation-degradation and regulates Xenopus axis formation. Proc. Natl. Acad. Sci. USA 96, 6273-6278.[Abstract/Free Full Text]

Liu, C., Li, Y., Semenov, M., Han, C., Baeg, G. H., Tan, Y., Zhang, Z., Lin, X. and He, X. (2002). Control of beta-catenin phosphorylation/degradation by a dual-kinase mechanism. Cell 108, 837-847.[CrossRef][Medline]

Liu, J., Xing, Y., Hinds, T. R., Zheng, J. and Xu, W.