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Fig. 3. Intra- and intermolecular interactions in the
-secretase complex. Given the hydrophobic nature of
-secretase, most prominent and primary interactions are likely to be governed through or include their TMDs and hydrophobic domains. Here we present a bird's eye view of the TMDs of PS1 (yellow), NCT (green), APH1 (blue) and PEN2 (red), including the reported intra- (grey arrows) and intermolecular (black arrows) interactions. Suggested interactions are shown by dotted arrows, such as intramolecular interactions in APH1 (via GxxG motifs in TMD4) and the as-yet-uncharacterised interaction domains for APH1 in PS1 and for NCT in APH1. Ectodomain interactions of NCT with APP-CTF are indicated with a green arrow (see text for details). The red sparkle denotes the catalytic aspartate dyad.