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Research Article
Aberrant cytoplasmic localization of ARID1B activates ERK signaling and promotes oncogenesis
Srinivas Animireddy, Padmavathi Kavadipula, Viswakalyan Kotapalli, Swarnalata Gowrishankar, Satish Rao, Murali Dharan Bashyam
Journal of Cell Science 2021 134: jcs251637 doi: 10.1242/jcs.251637 Published 26 February 2021
Srinivas Animireddy
1Laboratory of Molecular Oncology, Centre for DNA Fingerprinting and Diagnostics, Hyderabad 500039, India
2Graduate Studies, Manipal Academy of Higher Education, Manipal 576104, India
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Padmavathi Kavadipula
1Laboratory of Molecular Oncology, Centre for DNA Fingerprinting and Diagnostics, Hyderabad 500039, India
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Viswakalyan Kotapalli
1Laboratory of Molecular Oncology, Centre for DNA Fingerprinting and Diagnostics, Hyderabad 500039, India
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Swarnalata Gowrishankar
3Apollo Hospitals, Hyderabad 500033, India
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  • ORCID record for Swarnalata Gowrishankar
Satish Rao
4Krishna Institute of Medical Sciences, Hyderabad 500003, India
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Murali Dharan Bashyam
1Laboratory of Molecular Oncology, Centre for DNA Fingerprinting and Diagnostics, Hyderabad 500039, India
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  • ORCID record for Murali Dharan Bashyam
  • For correspondence: bashyam@cdfd.org.in bashyam69@gmail.com

Handling Editor: Daniel Billadeau

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ABSTRACT

The ARID1B (BAF250b) subunit of the human SWI/SNF chromatin remodeling complex is a canonical nuclear tumor suppressor. We employed in silico prediction, intracellular fluorescence and cellular fractionation-based subcellular localization analyses to identify the ARID1B nuclear localization signal (NLS). A cytoplasm-restricted ARID1B-NLS mutant was significantly compromised in its canonical transcription activation and tumor suppressive functions, as expected. Surprisingly however, cytoplasmic localization appeared to induce a gain of oncogenic function for ARID1B, as evidenced from several cell line- and mouse xenograft-based assays. Mechanistically, cytoplasm-localized ARID1B could bind c-RAF (RAF1) and PPP1CA causing stimulation of RAF–ERK signaling and β-catenin (CTNNB1) transcription activity. ARID1B harboring NLS mutations derived from tumor samples also exhibited aberrant cytoplasmic localization and acquired a neo-morphic oncogenic function via activation of RAF–ERK signaling. Furthermore, immunohistochemistry on a tissue microarray revealed significant correlation of ARID1B cytoplasmic localization with increased levels of active forms of ERK1 and ERK2 (also known as MAPK3 and MAPK1) and of β-catenin, as well as with advanced tumor stage and lymph node positivity in human primary pancreatic tumor tissues. ARID1B therefore promotes oncogenesis through cytoplasm-based gain-of-function mechanisms in addition to dysregulation in the nucleus.

This article has an associated First Person interview with the first author of the paper.

Footnotes

  • Competing interests

    The authors declare no competing or financial interests.

  • Author contributions

    Conceptualization: S.A., M.D.B.; Methodology: S.A., M.D.B.; Validation: S.A., M.D.B.; Formal analysis: S.A., M.D.B.; Investigation: S.A., P.K., V.K., S.G., S.R.; Resources: S.G., M.D.B.; Data curation: S.A., M.D.B.; Writing - original draft: M.D.B.; Writing - review & editing: S.A., M.D.B.; Supervision: M.D.B.; Project administration: M.D.B.; Funding acquisition: M.D.B.

  • Funding

    The work was supported by a grant (BT/PR13948/BRB/10/1406/2015) from the Department of Biotechnology, Ministry of Science and Technology, India, to M.D.B. S.A., a registered PhD student of Manipal Academy of Higher Education, is grateful to the Department of Science and Technology, Ministry of Science and Technology, India (DST/INSPIRE Fellowship/2012/824) for junior and senior research fellowships.

  • Supplementary information

    Supplementary information available online at https://jcs.biologists.org/lookup/doi/10.1242/jcs.251637.supplemental

  • Received July 15, 2020.
  • Accepted December 16, 2020.
  • © 2021. Published by The Company of Biologists Ltd
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Keywords

  • ARID1B
  • NLS
  • c-RAF
  • ERK signaling
  • Wnt–β-catenin signaling

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Research Article
Aberrant cytoplasmic localization of ARID1B activates ERK signaling and promotes oncogenesis
Srinivas Animireddy, Padmavathi Kavadipula, Viswakalyan Kotapalli, Swarnalata Gowrishankar, Satish Rao, Murali Dharan Bashyam
Journal of Cell Science 2021 134: jcs251637 doi: 10.1242/jcs.251637 Published 26 February 2021
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Research Article
Aberrant cytoplasmic localization of ARID1B activates ERK signaling and promotes oncogenesis
Srinivas Animireddy, Padmavathi Kavadipula, Viswakalyan Kotapalli, Swarnalata Gowrishankar, Satish Rao, Murali Dharan Bashyam
Journal of Cell Science 2021 134: jcs251637 doi: 10.1242/jcs.251637 Published 26 February 2021

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