Integrin receptors mediate the formation of adhesion complexes and play important roles in signal transduction from the extracellular matrix. Integrin-based adhesion complexes (IAC) contain proteins that link integrins to the cytoskeleton and recruit signaling molecules, including vinculin,paxillin, focal adhesion kinase, talin and α-actinin. In this study, we describe a ∼160 kDa protein that is markedly enriched at IAC induced by clustering integrins with fibronectin-coated beads. Protein sequence analysis reveals that this ∼160 kDa protein is kinectin. Kinectin is an integral membrane protein found in endoplasmic reticulum, and it serves as a receptor for the motor protein kinesin. Fibronectin-induced IAC sequestered over half of the total cellular content of kinectin within 20 minutes. In addition, two other ER-resident proteins, RAP [low-density lipoprotein receptor-related protein (LRP) receptor-associated protein] and calreticulin, were found to be clustered at IAC, whereas kinesin was not. Our results identify a novel class of constituents of IAC.
Introduction
Integrin transmembrane receptors play critical structural roles in linking the actin skeleton to the extracellular matrix (ECM). The integrin family is also involved in cellular processes such as adhesion, signal transduction,migration, growth and differentiation(Hynes, 1992;Sonnenberg, 1993;Clark and Brugge, 1995;Schwartz et al., 1995;Sastry and Horwitz, 1996;Aplin et al., 1999;Giancotti and Ruoslahti, 1999;Humphries, 2000;Hynes and Zhao, 2000;Yamada and Danen, 2000). When cells attach to ECM proteins such as fibronectin, laminin and collagen via integrins, these ligands crosslink or cluster integrins into cell surface complexes. Ligand-binding and clustering by integrins are critically important for activation of intracellular responses. They lead to the recruitment and organization of a number of cytoskeletal and signaling proteins into specialized cell-substrate adhesions, such as focal and fibrillar adhesions,where integrins serve as a complex link to the ECM(Burridge et al., 1988;Jockusch et al., 1995;Geiger et al., 2001;Zamir and Geiger, 2001). These multimolecular complexes are known to play important roles in modulating cell signaling and cytoskeletal dynamics(Sastry and Burridge, 2000;Geiger et al., 2001), but their constituents are not yet fully characterized.
To analyze cellular responses to integrin clustering, an experimental approach was developed using beads coated with integrin ligands to mimic cell-to-ECM adhesion formation (Grinnell and Geiger, 1986; Plopper and Ingber, 1993). For example, fibronectin-coated beads can rapidly induce the accumulation of vinculin, paxillin, α-actinin, talin and F-actin (Grinnell and Geiger,1986; Mueller et al.,1989; Plopper and Ingber,1993; Lewis and Schwartz,1995; Miyamoto et al.,1995b). This procedure also permits the rapid isolation of intact integrin-based adhesion complexes (IAC) after integrin crosslinking and allows searches for cytoskeletal and other components that associate with IAC(Plopper and Ingber,1993).
Previous studies using beads coated with integrin ligands or integrin antibodies have shown that both integrin occupancy and clustering into aggregates play important roles in IAC formation, and that these two signals can synergize; a `hierarchy' of molecules requiring either one or both of these signals to accumulate was identified(Miyamoto et al., 1995a;Miyamoto et al., 1995b). Numerous cytoskeletal proteins have been localized to the IAC by morphological and biochemical approaches, but integrin clustering can also induce the aggregation of growth factor receptors, stimulate the phosphorylation of FGF,EGF and PDGF receptors, and activate downstream signal transduction(Plopper et al., 1995;Schwartz et al., 1995;Miyamoto et al., 1996;Sundberg and Rubin, 1996). In addition, recent studies have shown that mRNA and ribosomes also localize to IAC when integrins are clustered with FN-coated beads(Chicurel et al., 1998). Furthermore, cell adhesion induces increased translation of pre-existing mRNAs(Benecke et al., 1978;Farmer et al., 1978). Taken together, these studies indicate that IAC are important for redistribution of cytoplasmic components and a variety of integrin functions.
In the present study, we have used beads coated with a specific integrin ligand to isolate intact IAC in order to identify new proteins that associate with these complex cellular structures. We searched for novel component(s)that might be particularly markedly sequestered from the cytoplasm into IAC compared with other components to potentially establish the concept of differential recruitment. Unexpectedly, we found that kinectin, an integral membrane protein prominent in endoplasmic reticulum (ER) that binds to kinesin and is involved in vesicle transport, becomes strikingly localized to intracellular sites at regions where cells are in contact with FN ligand. Over 50% of total cellular kinectin becomes associated with fibronectin-integrin adhesion sites, an enrichment many times higher than the classical components vinculin and paxillin. Furthermore, two ER-resident proteins, RAP and calreticulin, accumulate at these sites. Our results demonstrate that IAC formation can trigger integrin-mediated differential recruitment of cytoplasmic components, and suggest control of the localization of a portion of the ER, thereby potentially influencing sites of ER-based protein synthesis and secretion.
Materials and Methods
Antibodies and reagents
Mouse monoclonal antibodies against fibronectin, PKCδ and paxillin were purchased from Transduction Laboratories. The kinectin-specific monoclonal antibody KR160.9 has been described previously(Toyoshima et al., 1992) and was kindly provided by Michael Sheetz (Columbia University). Talin rabbit polyclonal antibody was generously provided by Keizo Takenaga [National Institute of Dental and Craniofacial Research (NIDCR), NIH]. Monoclonal actin,α-actinin, dynein, tubulin, vinculin and VSV glycoprotein (P5D4)antibodies were obtained from Sigma. Polyclonal anti-α5β1 integrin rabbit antibody (Rab 3847)was described previously (Roberts et al.,1988), and a polyclonal anti-β1 integrin rabbit antibody (Rab 4080) was produced against a synthetic peptide representing theβ 1 C-terminal cytoplasmic domain. Function-blocking anti-β1 rat mAb13 monoclonal antibody and non-inhibitory ES66 control antibody (same IgG isotype that binds without affecting function to chicken but not human β1) were characterized previously(Duband et al., 1988;Akiyama et al., 1989;Miyamoto et al., 1995a). Mouse mAb 12G10 against human β1 integrin was described previously(Mould et al., 1995). Calreticulin-and tensin-specific antibodies were purchased from Upstate Biotechnology. Kinesin-specific monoclonal antibody (MAB 1614) was obtained from Chemicon, and rhodamine-phalloidin was purchased from Molecular Probes. Monoclonal antibody (mAb 7F1) against LDL receptor-related protein (LRP)receptor-associated protein (RAP) was generously provided by Dudley Strickland, (American Red Cross, Rockville, MD). Non-conjugated, Cy3-, or FITC-conjugated goat anti-mouse, -rabbit, or -rat IgG antibodies were purchased from Jackson Immunoresearch Laboratories.
Polystyrene microbeads (mean diameter 10 μm) were obtained from Polysciences, Inc. Tosyl-activated magnetic microbeads (mean diameter 4.5μm) were purchased from Dynal. Human plasma fibronectin (FN) and vitronectin (VN) were purified as previously described(Miekka et al., 1982;Yatohgo et al., 1988). Collagen I (Vitrogen 100) was purchased from Collagen Corp. Concanavalin A(ConA) and poly-DL-lysine were obtained from Sigma. FN fragments containing type III repeats 5-10 (III5-10) and type III repeats 5-10 with the RGD sequence mutated to KGE (III5-10KGE) were described previously(Danen et al., 1995) and were generously provided by Shinichi Aota (CDBRB, NIDCR, NIH).
Plasmid DNAs for pRK-VSV-tensin and pRK-VSV were kindly provided by Kazue Matsumoto (CDBRB, NIDCR, NIH). The pRK-VSV plasmid was prepared by inserting two continuous VSV sequences with a Kozak consensus sequence in a cytomegalovirus promoter-based expression system. The puromycin resistance plasmid pHA262pur was generously provided by Hein te Riele (Netherlands Cancer Institute, Amsterdam, The Netherlands)(Lacalle et al., 1989).
Preparation of cDNAs encoding kinectin and its fragments
Plasmid constructs designed to express five portions of kinectin and full-length kinectin are depicted in Fig. 7A. The eukaryotic expression vector pRK-VSV containing a VSV tag was used to place the kinectin cDNAs under the transcriptional control of the cytomegalovirus promoter.
The cDNAs encoding various portions of kinectin shown inFig. 7A were assembled from restriction fragments of PCR-generated kinectin cDNAs, which were generated using as template the full-length chick kinectin cDNA plasmid pGinKNT(Yu et al., 1995) kindly provided by Michael Sheetz (Columbia University). The fragment I construct(designated PCR fragment 1; Table 1) encoding residues 1-326 of kinectin was generated by PCR using primers 1 and 2 (Table 2). PCR fragment 1 (1007 bp) was cleaved by EcoRI and SalI and ligated into EcoRI-SalI linearized vector pRK-VSV. Similarly, constructs for fragments II, III, IV and V(Table 1) encoding various portions (residues 327-629, 630-935, 935-1365 and 327-1365) of kinectin were prepared as described for fragment I.
Fragment designation . | Nucleotide residues . | Amino acid residues . | Upstream primer* . | Downstream primer* . | Construct name . | |||||
---|---|---|---|---|---|---|---|---|---|---|
1 | 58-1062 | 1-326 | 1 | 2 | I | |||||
2 | 1035-1971 | 327-629 | 3 | 4 | II | |||||
3 | 1944-2889 | 630-935 | 5 | 6 | III | |||||
4 | 2856-4176 | 935-1365 | 7 | 8 | IV | |||||
5 | 1035-4176 | 327-1365 | 3 | 8 | V | |||||
PCR fragments 1-5 were generated using the indicated primers with chick kinectin as template. |
Fragment designation . | Nucleotide residues . | Amino acid residues . | Upstream primer* . | Downstream primer* . | Construct name . | |||||
---|---|---|---|---|---|---|---|---|---|---|
1 | 58-1062 | 1-326 | 1 | 2 | I | |||||
2 | 1035-1971 | 327-629 | 3 | 4 | II | |||||
3 | 1944-2889 | 630-935 | 5 | 6 | III | |||||
4 | 2856-4176 | 935-1365 | 7 | 8 | IV | |||||
5 | 1035-4176 | 327-1365 | 3 | 8 | V | |||||
PCR fragments 1-5 were generated using the indicated primers with chick kinectin as template. |
The primer designations refer to those described inTable 2.
Primer no. . | Oligonucleotide sequence . | Positions* . | ||
---|---|---|---|---|
1 | AGAAAAgaattcATGGAGTTTTACGAGTCT EcoRI | 58-88 | ||
2 | CTTGTCgTcgAcCTaATGTATAGCTGCAGCCGA SalI | 1030-1063 | ||
3 | GCAGTCgaAttcCAGCTGCAAGACAAGGAG EcoRI | 1048-1078 | ||
4 | CAAGACgTCgAcCTaTTCTTCCTTGCTTGTTAA SalI | 1939-1972 | ||
5 | AGCAAGGAAttcGAGCTCAAGGTCTTGCAG EcoRI | 1957-1987 | ||
6 | CCGGCTgTcGAccTaCTGGACTTGGGATGCAGC SalI | 2856-2889 | ||
7 | GCTGCAgaattcGTCCAGGACCTGGAGAGC EcoRI | 2869-2899 | ||
8 | TCCCCCgtcgACTCATTCTACTAGCTGGTAATG SalI | 4164-4197 | ||
Mismatches with template are indicated in lowercase letters. Stop codons are shown in boldface. Restriction site recognition sequences are underlined. |
Primer no. . | Oligonucleotide sequence . | Positions* . | ||
---|---|---|---|---|
1 | AGAAAAgaattcATGGAGTTTTACGAGTCT EcoRI | 58-88 | ||
2 | CTTGTCgTcgAcCTaATGTATAGCTGCAGCCGA SalI | 1030-1063 | ||
3 | GCAGTCgaAttcCAGCTGCAAGACAAGGAG EcoRI | 1048-1078 | ||
4 | CAAGACgTCgAcCTaTTCTTCCTTGCTTGTTAA SalI | 1939-1972 | ||
5 | AGCAAGGAAttcGAGCTCAAGGTCTTGCAG EcoRI | 1957-1987 | ||
6 | CCGGCTgTcGAccTaCTGGACTTGGGATGCAGC SalI | 2856-2889 | ||
7 | GCTGCAgaattcGTCCAGGACCTGGAGAGC EcoRI | 2869-2899 | ||
8 | TCCCCCgtcgACTCATTCTACTAGCTGGTAATG SalI | 4164-4197 | ||
Mismatches with template are indicated in lowercase letters. Stop codons are shown in boldface. Restriction site recognition sequences are underlined. |
The numbers correspond to residues within chick kinectin cDNA(Yu et al., 1995).
For construction of full-length kinectin, pGinKNT(Yu et al., 1995) plasmid DNA was digested with BglI and BglII to liberate a 2759 bp kinectin fragment encoding kinectin nucleotides 1015 to 3774. Kinectin contains both BglI and BglII sites (1015 and 3774 in the kinectin sequence). PCR-generated fragment 1 was subjected to EcoRI and BglI digestion to obtain an EcoRI-BglI fragment encoding kinectin nucleotides 58-1015. PCR-generated fragment 4 was digested with BglII and SalI restriction enzymes to generate a BglII-SalI fragment encoding kinectin nucleotides 3774 to 4176. Full-length 4126bp kinectin cDNA was prepared by ligation of EcoRI-BglI fragment 1, the 2759bp BglI-BglII kinectin fragment, and BglII-SalI fragment 4 together into a linearized EcoRI-SalI pRK-VSV vector. Plasmid DNAs of all PCR-generated fragments were subjected to complete DNA sequencing analysis to confirm the integrity of each construct.
Cell culture and transfection
Primary human foreskin fibroblasts (HFF) and 293 cells were maintained in Dulbecco's modified Eagle (DME) medium (Gibco/BRL Life Technologies)supplemented with 10% fetal bovine serum (Hyclone), 100 units/ml penicillin and 100 μg/ml streptomycin. The cells were a gift from Susan Yamada (NIDCR,NIH) and were used at cell passages 9-22. The NIH3T3 cell line was obtained from American Type Culture Collection. These cells were maintained in DME medium supplemented with 10% bovine calf serum, 100 units/ml penicillin and 100 μg/ml streptomycin. Transient transfections of kinectin and its fragments into NIH3T3 cells were performed using Lipofectamine Plus (Gibco/BRL Life Technologies) according to the protocol provided by the manufacturer. In other experiments, kinectin plasmid DNAs were introduced into HFF by electroporation. Briefly, pRK-VSV containing either no insert or full-length kinectin, kinectin fragments or tensin (30 μg each) was transfected into 1.5×106 cells by electroporation. Cells were then cultured in serum-containing medium for 24 hours with 5 mM sodium butyrate to enhance expression of transfected genes. In some experiments, plasmid DNAs encoding kinectin or its fragments were transfected into HFF together with 6 μg of the puromycin selection vector pHA262pur. Cells were subcultured at a 1:3 dilution for 24 hours after transfection and were selected for 2 days in 1μg/ml puromycin-containing medium.
Isolation of integrin-based adhesion complexes (IAC)
IAC were isolated as described previously(Plopper and Ingber, 1993)with some minor modifications. Tosyl-activated magnetic beads (4.5 μm;Dynal) were coated with either anti-integrin antibodies, FN, FN fragment III5-10KGE, or ConA at 5 μg per 107 beads in 0.1 M phosphate buffer, pH 7.4, according to the manufacturer's protocol. Cells were removed from flasks by trypsin-EDTA and allowed to recover in DME medium containing 10% fetal bovine serum. Cells were then washed twice with DME medium containing 1% BSA and 20 mM Hepes, pH 7.6 and resuspended at 1×106 cells/ml. Cells were mixed with FN-, ConA-,III5-10-, III5-10KGE-, mAb13-, or ES66-coated beads (10 beads/cell) and rotated gently for 20 minutes using a rotator at 37°C. The complex of beads and bound cells was collected by a magnetic particle concentrator (Dynal) and was washed with 1 ml cold CSK buffer [50 mM NaCl, 300 mM sucrose, 3 mM MgCl2, protease inhibitor mixture (Boehringer Mannheim), and 1 mM PMSF in 10 mM PIPES, pH 6.8] without detergent. The pellet containing cell-bead complexes was extracted with 0.5 ml of cold CSK buffer containing 0.5% Triton X-100 and sonicated for 10 seconds with a 50 watt Ultrasonic Processor (Aldrich, model GE 50, set at amplitude 20). The beads-protein complexes were washed five times with 1 ml cold CSK buffer containing detergent. In experiments to test for nonspecific binding, beads were incubated with cell homogenates. Cells were homogenized in CSK buffer containing detergent and clarified by centrifugation in a microfuge at 19,000 g for 15 minutes at 4°C. The supernatants were incubated with FN- or ConA-coated beads for 15 minutes at 4°C; the beads were then washed and processed as described above.
Proteins were extracted from beads and subjected to SDS-PAGE and immunoblot analyses. The ratio of bead-bound to non-bound (soluble) protein was determined by quantitative densitometry and correction for the proportion of sample used for immunoblotting. For example, if gels were loaded with all of the material extracted from beads and 1/10 of the sonicated supernatant containing non-bound material, we calculated the ratio of bead-bound protein as R=B/10S, where R is the ratio, B is the absorbance of immunoblotted bound material, and S is the absorbance of immunoblotted supernatant fraction (1/10 volume). Alternatively, we calculated P=[B/(B+10S)]×100, where P is the percentage of a protein that was bead-bound.
Immunoprecipitation and immunoblot analyses
Confluent 293 cells (15 cm diameter dish) were lysed with 1 ml of RIPA lysis buffer [50 mM N-2-hydroxyethylpiperazine-N′-2-ethanesulfonic acid(Hepes; pH 7.5), 150 mM NaCl, 10% glycerol, 1.5 mM MgCl2, 1 mM EGTA, 1 mM sodium vanadate, 10 mM sodium pyrophosphate, 100 mM NaF, 1% Triton X-100, 1% sodium deoxycholate, 0.1% sodium dodecyl sulfate (SDS), protease inhibitor mixture (Boehringer Mannheim) and 1 mM phenylmethylsulfonyl fluoride]. The cell extracts were clarified by centrifugation at 20,000 g for 15 minutes at 4°C. The supernatants were absorbed with protein G-Sepharose for 1 hour at 4°C and centrifuged at 5000 g for 5 minutes at 4°C. Antibodies (4 μg/ml) and a fresh aliquot of protein G-Sepharose (30 μl/1 ml of lysate) were added to the supernatants and incubated for 1 hour or overnight at 4°C. The immunoprecipitated proteins were washed five times with RIPA buffer at 4°C. Protein complexes bound to beads were solubilized in reducing SDS-PAGE sample buffer, boiled for 5 minutes, separated by SDS-PAGE, and transferred to nitrocellulose membranes (Novex) for 1.5 hours at 30 V.
Unoccupied protein binding sites were blocked by incubating the membranes with blocking buffer [5% nonfat dried milk in TBS-T (150 mM NaCl, 50 mM Tris-HCl, 0.1% Tween-20, pH 7.4)]. Antibodies were diluted in blocking buffer and incubated with membranes for 1 hour at room temperature. The membranes were washed with TBS-T and incubated with horseradish peroxidase-conjugated goat antimouse or -rabbit IgG (Bio-Rad). Bound antibodies were visualized using a SuperSignal kit (Pierce) and Hyperfilm (Amersham).
Partial amino acid sequence analysis
Partially immuno-affinity purified ∼160 kDa polypeptide was separated by SDS-PAGE and transferred to nitrocellulose. The polypeptide band migrating at ∼160 kDa was visualized by staining with Ponceau S (Sigma) and excised from the membrane. The nitrocellulose strip containing the 160 kDa polypeptide was digested with endoproteinase Lys-C (Boehringer Mannheim) in 0.1 M NH4HCO3 as described(Aebersold et al., 1987). The liberated digest was fractionated on a Vydac C18 column using a microbore HPLC (Model 130; Applied Biosystems). Peptides from individual peaks were then subjected to Edman degradation using a protein sequencer (Model 477A; Applied Biosystems).
Indirect immunofluorescence microscopy and bead-binding assay
Polystyrene beads (mean diameter 10 μm, or 4.5 μm for comparisons)were coated with 50 μg/ml FN, 100 μg/ml ConA, or 100 μg/ml polylysine in 0.1 M carbonate buffer, pH 9.5, at 4°C overnight. The ligand-coated beads were blocked with 1% BSA in Dulbecco's PBS (D-PBS) for 1 hour at room temperature. Glass coverslips (12 mm; Carolina Biological Supply Company) were coated overnight with 20 μg/ml type I collagen (Vitrogen 100, Collagen Corp.) in D-PBS and then blocked with 1% heat-denatured BSA for 1 hour at room temperature. To inhibit FN synthesis so as to retain a diffuse distribution of FN receptors, HFF cells were incubated with DME medium containing 25 μg/ml of cycloheximide and 10% FN-depleted fetal bovine serum for 2 hours at 37°C. Cells were detached with trypsin-EDTA and allowed to recover in DME medium containing cycloheximide and FN-depleted serum for 45 minutes. Cells(2×104) were plated on collagen-coated coverslips for 30 minutes at 37°C. Ligand-coated beads were then added to the cells at a ratio of 10 beads per cell and incubated for 20 minutes at 37°C. Subsequently, the cells were fixed with 4% paraformaldehyde with 5% sucrose in D-PBS for 20 minutes and permeabilized with 0.4% Triton X-100 in PBS for 5 minutes at room temperature.
For kinectin staining, HFF were plated on FN-coated coverslips (10μg/ml) for time periods ranging from 20 minutes to 2 hours,fixed-permeabilized for 3 minutes with the above fixative containing 0.5%Triton X-100, and post-fixed for an additional 20 minutes with the fixative alone. The coverslips were incubated with an appropriate dilution of different primary antibodies in D-PBS for 1 hour at room temperature. The coverslips were then washed with D-PBS three times and incubated with Cy3-conjugated secondary IgG in D-PBS. Double staining with two primary mouse antibodies was achieved as follows: The fixed samples were blocked with 20% donkey serum in D-PBS for 30 minutes, washed, and stained with mouse anti-kinectin antibody for another 30 minutes. After three 5-minute washes with D-PBS containing 0.05% Tween 20 (D-PBST), the samples were incubated for 30 minutes with goat anti-mouse IgG (25 μg/ml in D-PBST, 0.5% donkey serum) and washed as above. To prevent possible redistribution of bound antibodies, the samples were fixed briefly again (10 minutes), washed, and blocked again with 20% donkey serum in D-PBS for 15 minutes. The coverslips were then stained with the appropriate dilution of the second primary mouse antibody (anti-α-actinin) for 30 minutes. After three washes with D-PBST, the samples were incubated for 30 minutes with a mixture of labeled secondary antibodies consisting of FITC-conjugated donkey anti-goat and Cy3-conjugated donkey antimouse IgGs to visualize kinectin and α-actinin, respectively. Specificity was confirmed by appropriate controls.
After three washes with D-PBST, each coverslip was mounted on a glass slide with mounting medium (Biomeda) containing 1 mg/ml 1,4 phenylenediamine to minimize photobleaching. Immunofluorescent samples were examined using a Zeiss Axiophot fluorescence microscope. Accumulation of a particular protein at a bead was assayed as described previously(Miyamoto et al., 1995b) and scored as positive if it localized as aggregates or thick zones around at least half of the bead.
Results
Accumulation of 160 kDa protein with FN-coated beads
In order to identify new proteins involved in integrin-mediated responses that might meet our hypothesized criterion of marked enrichment at integrin-based adhesion complexes (IAC), we used magnetic beads coated with integrin ligands to specifically induce formation of IAC. This system is known to induce transmembrane aggregation of a variety of cytoskeletal proteins involved in adhesion and signaling. This bead system for rapid experimental induction of IAC was initially used to explore whether protein kinase C family members physically associate with IAC. The proteins that bound to FN- or ConA-coated magnetic beads were electrophoresed on SDS-containing polyacrylamide gels, transferred to nitrocellulose, and probed with a putative PKCδ monoclonal antibody. We detected the prominent accumulation of a∼160 kDa protein with FN-coated beads but not with ConA-coated beads(Fig. 1). Although subsequent studies showed that PKCδ itself could not be detected in association with IAC (data not shown), this ∼160 kDa protein was exceptionally enriched in bead-induced IAC. Crossreactivity of a particular monoclonal antibody with epitopes on two proteins is not unusual(Marchalonis et al., 2001)and, in this case, it permitted further studies of this fortuitously identified integrin-redistributed protein.
Partial amino acid sequence analysis of 160 kDa protein
Internal proteolytic peptides were generated from the 160 kDa protein by Lys-C digestion. These peptides were purified by HPLC and subjected to microsequencing. The amino acid sequence of these peptides was used to search protein databases. As shown in Fig. 2, the sequence of these peptides matched exactly with the human CG1 or kinectin sequence (Toyoshima et al., 1992; Futterer et al.,1995; Print et al.,1996).
Kinectin accumulation with FN-coated beads
Immunoblot analysis using the monoclonal KR160 antibody against kinectin confirmed that the 160 kDa protein associated with FN was kinectin(Fig. 3A). In order to test the specificity of kinectin association with IAC induced by integrin clustering,we used beads coated with an FN fragment containing the cell-binding domain(III5-10) or the adhesion-blocking/mimicking β1integrin monoclonal antibody mAb13 to induce formation of IAC. As shown inFig. 3, kinectin accumulated with wildtype fragment III5-10RGD(Fig. 3A) or mAb13-coated beads(Fig. 3B) but not with a mutated version of III5-10 that had its RGD site substituted by KGE(III5-10KGE, Fig. 3A), nor with class-matched control monoclonal antibody ES66-coated beads (Fig. 3B). We next examined whether kinectin specifically accumulates with IAC or merely binds directly to FN-coated beads. As shown inFig. 3C), kinectin did not bind to FN- or ConA-coated beads that were mixed with cell homogenates(Fig. 3C, Lysate). In contrast,we again detected kinectin accumulation with IAC after integrin clustering induced by the same FN-coated beads interacting with the exterior of living cells (Fig. 3C, Cells). Taken together, these results indicate that kinectin is specifically recruited to IAC after integrins are clustered.
The proportion of total cellular kinectin bound to beads was determined by densitometry of western immunoblots (e.g.Fig. 4). The ratio of bead-bound to soluble kinectin was 1.3±0.31 (s.e.m.), indicating that 57% of total cellular kinectin became associated with bead-bound complexes. In this bead-binding system, cytoskeletal molecules such as actin, vinculin,paxillin, talin, tensin and α-actinin also accumulated with beads coated with FN or FN fragment III5-10(Fig. 4, Beads). None of these proteins was clustered and isolated with FN mutant fragment III5-10KGE-coated beads (Fig. 4) or with control ConA-coated beads (data not shown). Interestingly, the bead-binding ratios for the well-known IAC constituents vinculin and paxillin were only 1.6% and 0.2%, respectively, of the total cellular content of these proteins.
Since kinectin is a kinesin-binding protein and an ER integral membrane protein, we examined whether other proteins involved in vesicular transport could accumulate with FN-coated beads. As shown inFig. 4, in comparison to kinectin, relatively little dynein accumulated after binding of FN-coated beads; mutant FN fragment III5-10KGE-coated beads showed neither kinectin nor dynein accumulation (Fig. 4). Interestingly, neither FN-coated beads nor FN fragment III5-10-coated beads (nor FN fragment III5-10KGE-coated beads) induced the accumulation of either kinesin or tubulin(Fig. 4). These results indicated that kinectin can be clustered specifically upon integrin aggregation by fibronectin in the absence of substantial accumulation of kinesin and tubulin.
Cellular distribution of kinectin
Immunofluorescence analysis of human fibroblasts with anti-kinectin antibodies at early times after adhesion to tissue culture substrates revealed a linear staining pattern in addition to the expected endoplasmic reticulum staining. This staining was less intense than within the ER, but it was highly reproducible and particularly prominent at early times of cell spreading(Fig. 5). This kinectin localization was organized as fibrils (Fig. 5A,B) that were parallel to actin stress fibers(Fig. 5B,b,b',c,c'). Kinectin staining was absent from α-actinin-positive focal adhesions(Fig. 5A,c,c'). After 1 hour of spreading, only occasional cells demonstrated this fibrillar pattern of staining, indicating that this kinectin accumulation was transient.
In order to test further for the accumulation of kinectin after integrin crosslinking, we used immunofluorescence staining of human foreskin fibroblasts after binding of FN-coated beads in a system for visualizing rapid experimental induction of adhesive complexes. As shown inFig. 6A, kinectin showed marked accumulation in a zone around the FN-coated beads. In the experiment shown inFig. 6, semi-quantitative analysis showed that 53% of the FN-coated beads induced clear kinectin complex formation, while polylysine-coated beads were only 3% positive (significant at the P<0.0001 level by unpaired t-test). Similar results were observed when smaller-sized beads (4.5 μm) coated with FN were used(data not shown). Under the same conditions, activated β1integrin staining also showed similar aggregation around FN beads(Fig. 6I). As expected,cell-substrate adhesion proteins such as paxillin and tensin also accumulated around the FN-coated beads (Fig. 6G; and data not shown). In addition, we observed similar results when cells were clustered with beads coated with the adhesion-blocking/mimicking monoclonal antibody mAb13 to theβ 1 integrin (data not shown). Similar observations were also seen in WI-38 lung fibroblasts after clustering with FN-coated beads (data not shown). In contrast, polylysine-coated beads did not induce any such transmembrane accumulation (Fig. 6B,H,J) nor did ConA-coated beads (data not shown). The possibility that kinectin might bind directly to accumulations of F-actin was tested using a standard actin polymerization assay; no binding could be detected, even though α-actinin in the same samples bound efficiently to the F-actin (data not shown).
Since kinectin is an endoplasmic reticulum-associated protein, we next examined whether other ER-resident proteins could be accumulated after cells were clustered with FN-coated beads. Calreticulin and RAP were both clustered around the FN-coated beads (Fig. 6C and E, respectively). In the experiment shown inFig. 6, clear calreticulin accumulation was observed around 39% of the FN-coated beads and around only 3.5% of the polylysine-coated beads (P<0.0001). Similarly, RAP exhibited 51% positive accumulation around FN-coated beads, but only 4.7%around the polylysine-coated beads (P<0.0001). In contrast,neither fibronectin- nor polylysine-coated beads induced clustering of tubulin(Fig. 6K,L). In addition,treating HFF with microtubule-modifying drugs such as nocodazole had no effect on the recruitment of kinectin to FN-coated beads (data not shown). Taken together, these results show that kinectin and two other ER-associated proteins are recruited to the sites of integrin clustering.
Both N-terminal and C-terminal portions of kinectin are clustered with FN-coated beads
To localize the region(s) of kinectin involved in clustering after integrin crosslinking, NIH3T3 cells were transfected with various fragments of kinectin, and the cells were incubated with FN-coated beads. Proteins bound to FN-coated beads were separated by SDS-PAGE, transferred to nitrocellulose membranes, and probed with VSV antibody. As shown inFig. 7B, both N-terminal and C-terminal portions of kinectin (residues 1-326 and 935-1365, respectively)were also clustered with FN-coated beads. Other fragments encoding residues 327-629 and 630-935 were not detected in the beads-protein complexes, whereas a large fragment (327-1365) containing the C-terminal region was bound(Fig. 7B). In addition, as expected, VSV-tensin was clustered around the FN-coated beads (not shown). The protein expression levels of VSV-kinectin and its fragments in NIH3T3 cells are shown in Fig. 7C. As expected in controls expressing VSV alone, we did not detect any VSV-reactive protein bands of sizes ∼30-200 kDa clustered around FN-coated beads or in the extract of cells transfected with VSV alone(Fig. 7B,C). These data indicate that the N-terminal hydrophobic and C-terminal α-helical coil-coiled regions of kinectin contain binding site(s) involved in the localization of kinectin at IAC.
Next, we examined whether the accumulation of N-terminal and C-terminal portions of kinectin at IAC can be detected by immunofluorescence staining of cells after integrin clustering using FN-coated beads. Human foreskin fibroblasts were transfected with various fragments of kinectin and then clustered with FN-coated polystyrene beads. As shown inFig. 7D, fragments from the middle half of kinectin (containing residues 327-629 and 630-935) were not significantly accumulated at the FN-coated beads(Fig. 7Dc,d). In contrast, the hydrophobic N-terminal region (1-327) and both fragments containing the C-terminal domain (935-1365 and 327-1365) accumulated with FN-coated beads(Fig. 7Db,e). These results confirm that both N-terminal and C-terminal portions of kinectin are individually capable of associating with IAC.
Discussion
This study has tested for differential recruitment of components to integrin-based adhesion complexes, searching for a molecule particularly highly enriched after integrin clustering. We found unexpectedly that kinectin, an integral membrane protein also involved in vesicular transport,is recruited to adhesion complexes in large quantities upon integrin clustering. Remarkably, over half of the total cellular complement of kinectin accumulated at sites of fibronectin-integrin complexes at the cell surface. This massive recruitment of kinectin to IAC should be compared with the <2%accumulation of the well-known adhesion plaque proteins vinculin and paxillin observed at IAC. We also found that two other ER-resident proteins,calreticulin and RAP, accumulated at the IAC. However, kinesin did not co-accumulate with kinectin in IAC. In addition, we have shown that both the N-terminal (1-326) and C-terminal (935-1365) regions of kinectin can mediate kinectin association with IAC. These results indicate that integrin-induced IAC can regulate the localization of kinectin and ER components, and they point to selective recruitment of at least one cytoplasmic component at exceptionally high efficiency.
It is noteworthy that the molecule for which kinectin is the receptor,kinesin, is not co-accumulated during the striking clustering of kinectin. Moreover, tubulin is not co-accumulated, and the process is not inhibited by disruption of microtubules. Thus, the integrin-mediated clustering of kinectin appears to be independent of the classical microtubule-kinesin-kinectin system.
Although the redistribution of kinectin to IAC in bead-induced integrin clustering assays is specific and massive, thereby establishing the principle that integrins have the ability to control the global distribution of a specific cytoplasmic protein, the normal biological role of this phenomenon is not yet clear. In a popular but also arguably artificial type of assay system— the attachment of cells to a flat tissue culture substrate — a portion of the kinectin molecules show a transient, novel redistribution to oriented fibrillar structures overlapping actin stress fibers. Thus, both adhesion to beads and to a planar surface induce temporary kinectin redistribution. Kinectin is not found in focal adhesions on these planar surfaces, yet it is found in experimental IAC. However, bead-induced IAC are not direct equivalents of focal adhesions: they transiently accumulate high levels of many signaling molecules, such as tyrosine kinase receptors, which are difficult to demonstrate in normal focal adhesions. We speculate that these adhesion complexes induced by beads represent a maximal cellular adhesive response to integrins and are structures combining the properties of several types of integrin-based adhesion [i.e. focal complexes, focal adhesions, fibrillar adhesions and/or others (see alsoGeiger et al., 2001)].
The co-accumulation of ER-resident proteins calreticulin and RAP with kinectin at IAC suggest that integrin clustering might play a role in helping to direct proteins newly synthesized in the ER to the site where signals are initiated by integrin aggregation. This result extends the observation that ribosomes and mRNA are targeted to IACs that form when cells bind to FN-coated beads (Chicurel et al., 1998)to include localization of kinectin and a fraction of the endoplasmic reticulum itself. The redistribution of mRNA and ribosomes, kinectin,calreticulin and RAP to the IAC might contribute to the rapid increase in protein synthesis in response to cell adhesion, which occurs before changes in transcription are detectable (Benecke et al., 1978; Chicurel et al.,1998). Taken together, our results suggest the possibility that directing ER, and consequently newly ER-synthesized proteins, to the vicinity of IAC may constitute a novel function of integrin signaling. Calreticulin has been shown to associate with the cytoplasmic domains of integrinα-subunits although, in these studies, it was originally thought to be free in the cytoplasm rather than still within the ER(Rojiani et al., 1991;Leung-Hagesteijn et al., 1994;Coppolino et al., 1995). Other ER-resident proteins involved in chaperone function or vesicular transport may also participate in this novel kinectin-related integrin accumulation function. RAP (39 kDa receptor-associated protein) is another ER-resident protein that binds to the low-density lipoprotein receptor-related protein(LRP) (Bu et al., 1995). Binding of RAP to LRP inhibits all ligands from binding to LRP in vitro. Recent studies have demonstrated that RAP interacts with LRP in vivo,functions as a molecular chaperone for LRP, and regulates its ligand binding activity along the secretory pathway (Bu et al., 1995; Willnow et al.,1996; Willnow,1998).
Kinectin is an integral membrane protein of the ER, and its best-known function is to serve as a receptor for the molecular motor kinesin(Toyoshima et al., 1992;Kumar et al., 1995). This latter motor protein is involved in microtubule-based vesicle transport towards microtubule plus-ends, thereby directing vesicle movement towards the cell periphery; in contrast, the dynein motor protein is involved in vesicle movement towards the cell center (Vallee and Shpetner, 1990; Walker and Sheetz, 1993). Antibody to kinectin has been shown not only to inhibit kinesin-membrane binding and plus-end-directed vesicle movement, but also to diminish the binding of dynein to membranes and reduce minus-end-directed vesicle movement in vitro to a lesser extent(Kumar et al., 1995). Kinectin antibody inhibits the movement of the glycoprotein of vesicular stomatitis virus (VSV G protein) from the ER to the Golgi and to the plasma membrane. Kinectin fragments derived from the α-helical coil-coiled region bind to kinesin and dynein and inhibit vesicle transport in vitro(Kumar et al., 1997). Therefore, one important function of kinectin may be as a component in vesicle transport (Sheetz, 1996),serving as a receptor for both kinesin and dynein and helping these motor proteins direct the cycle of vesicle movement in cells. The exact mechanisms by which cells control vesicle transport, directionality and particularly secretion at specific membrane sites are unclear. Recent studies have shown that small G-proteins, such as Rac1, RhoD, RhoA and RhoG, bind to kinectin and can modulate its motile activities (Hotta et al., 1996; Vignal et al.,2001). Others have also shown that endocytic vesicles contain a variety of cytoskeletal proteins including kinesin, dynein, actin and tubulin(Pol et al., 1997). Kinectin can also regulate the activity of RhoG, indicating that it has functions beyond serving as a kinesin receptor(Vignal et al., 2001).
Although the mechanisms of kinectin accumulation at IAC are still unknown in the absence of any link to the classical kinesin-microtubule system, the rapid accumulation of over half of the total cellular content of this particular protein appears to be the most dramatic extent of redistribution of a cytoplasmic protein to IAC yet reported. It establishes the novel concept that integrin clustering can exercise global control over the cytoplasmic localization of at least one protein. We suggest that determining the relative enrichment of the many other constituents of IAC may provide further insight into the hierarchy of assembly and function of these complex structures.